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DEPS: Grouping deps and adding information to environment.yml #26691

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94 changes: 54 additions & 40 deletions environment.yml
Original file line number Diff line number Diff line change
Expand Up @@ -9,59 +9,73 @@ dependencies:
- python-dateutil>=2.5.0
- pytz

# development
# benchmarks
- asv

# building
- cython>=0.28.2

# code checks
- flake8
- flake8-comprehensions
- flake8-rst>=0.6.0,<=0.7.0
- gitpython
- hypothesis>=3.82
- ipywidgets
- isort
- moto
- flake8-comprehensions # used by flake8, linting of unnecessary comprehensions
- flake8-rst>=0.6.0,<=0.7.0 # linting of code blocks in rst files
- isort # check that imports are in the right order
- mypy
- pycodestyle # used by flake8
- pip:
- cpplint
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This seems to be available through conda-forge, if we want to switch to that: https://anaconda.org/conda-forge/cpplint. Understood if you want to keep this a purely a reorganization though.


# documentation
- gitpython # obtain contributors from git for whatsnew
- sphinx
- numpydoc>=0.9.0

# documentation (jupyter notebooks)
- nbconvert>=5.4.1
- nbformat
- notebook>=5.7.5
- nbsphinx
- pandoc
- pycodestyle
- pyqt
- python-snappy

# testing
- boto3
- botocore>=1.11
- hypothesis>=3.82
- moto # mock S3
- pytest>=4.0.2
- pytest-cov
- pytest-mock
- sphinx
- numpydoc>=0.9.0
- pytest-xdist
- seaborn
- statsmodels

# unused (required indirectly may be?)
- ipywidgets
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I don't recall why this was necessary.

- nbformat
- notebook>=5.7.5
- pip

# optional
- beautifulsoup4>=4.2.1
- blosc
- botocore>=1.11
- boto3
- bottleneck>=1.2.1
- fastparquet>=0.2.1
- html5lib
- ipython>=5.6.0
- ipykernel
- jinja2
- lxml
- matplotlib>=2.2.2
- nbsphinx
- ipython>=5.6.0
- jinja2 # pandas.Styler
- matplotlib>=2.2.2 # pandas.plotting, Series.plot, DataFrame.plot
- numexpr>=2.6.8
- openpyxl
- pyarrow>=0.9.0
- pytables>=3.4.2
- pytest-cov
- pytest-xdist
- s3fs
- scipy>=1.1
- seaborn
- sqlalchemy
- statsmodels
- xarray
- xlrd
- xlsxwriter
- xlwt
- pip:
- cpplint

# optional for io
- beautifulsoup4>=4.2.1 # pandas.read_html
- fastparquet>=0.2.1 # pandas.read_parquet, DataFrame.to_parquet
- html5lib # pandas.read_html
- lxml # pandas.read_html
- openpyxl # pandas.read_excel, DataFrame.to_excel, pandas.ExcelWriter, pandas.ExcelFile
- pyarrow>=0.9.0 # pandas.read_paquet, DataFrame.to_parquet, pandas.read_feather, DataFrame.to_feather
- pyqt # pandas.read_clipbobard
- pytables>=3.4.2 # pandas.read_hdf, DataFrame.to_hdf
- python-snappy # required by pyarrow
- s3fs # pandas.read_csv... when using 's3://...' path
- sqlalchemy # pandas.read_sql, DataFrame.to_sql
- xarray # DataFrame.to_xarray
- xlrd # pandas.read_excel, DataFrame.to_excel, pandas.ExcelWriter, pandas.ExcelFile
- xlsxwriter # pandas.read_excel, DataFrame.to_excel, pandas.ExcelWriter, pandas.ExcelFile
- xlwt # pandas.read_excel, DataFrame.to_excel, pandas.ExcelWriter, pandas.ExcelFile