Cython bindings and Python interface to HMMER3.
Detection of NCLDV signatures in 'omic data
Workflow for identifying and classifying homologous gene/protein sequences
A snakemake workflow for iterative sequence profile searching using jackhmmer from the HMMer3 package.
HMMER-based microcin search using full microcin sequences and double-glycine signal region.
Brivez is a bioinformatic tool thought as Quality of Life's improvement, providing high quantity of data in a snap, giving you a quick view on what you could find inside your transcriptome/sequences' list.
This repository offers two pipelines to process NGS data by identifying and counting functional regions based on profile HMMs and matching query sequences to these regions based on similarity. This work was carried out as part of my master's thesis at Lund University, completed at Bionamic AB.
This repository contains a set of scripts and workflows designed to search for Respiratory Complex I (NADH Ubiquinone Oxidoreductase) subunits in prokaryotic genomes and proteomes.
Add a description, image, and links to the hmmer3 topic page so that developers can more easily learn about it.
To associate your repository with the hmmer3 topic, visit your repo's landing page and select "manage topics."