Fast taxonomic classification of metagenomic sequencing reads using a protein reference database
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Updated
Apr 25, 2025 - C
Fast taxonomic classification of metagenomic sequencing reads using a protein reference database
Finds SNP sites from a multi-FASTA alignment file
An efficient FASTQ manipulation suite
Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R
SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.
A pipeline for detecting Somatic Insertion of DE novo RETROcopies
Human Mitochondrial sequencing data Analysis Toolkit. Fetching information like variants, heteroplasmy/homoplasmy, etc. on mitochondrial genome from sequencing data
Convert bam to two wig files with strand-specific coverage
A header-only C library for hashing DNA sequences
High performance computing and data processing
Code and report for a small tool to optimize 16S sequencing pipelines
A sequence-read simulator program for NGS
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